Cluster names changed to new format incorporating Swiss Prot abbreviations. A current list is included below.
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ACILW EPS emulsan |
EPS |
Acinetobacter lwoffii, strain RAG-1 |
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ACTAC EPS a |
EPS capsule: a |
Actinobacillus actinomycetemcomitans, strain SUNYaB75 |
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ACTAC EPS d |
EPS capsule: d |
Actinobacillus actinomycetemcomitans |
|
ACTAC LPS O-Ag b |
LPS O-antigen: b |
Actinobacillus actinomycetemcomitans, strain Y4 |
|
ACTAC LPS O-Ag c |
LPS O-antigen: c |
Actinobacillus actinomycetemcomitans, strain NCTC 9710 |
|
ACTAC LPS O-Ag e |
LPS O-antigen: e |
Actinobacillus actinomycetemcomitans |
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ACTAC LPS O-Ag f |
LPS O-antigen: f |
Actinobacillus actinomycetemcomitans |
|
BACFR EPS B1 |
EPS capsule: B1 |
Bacteroides fragilis, strain NCTC 9343 |
|
BACFR EPS PS B2 |
EPS capsule: PS B2 |
Bacteroides fragilis, strain 638R |
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BORPE LPS(A) O-Ag |
LPS(Band A) O-antigen |
Bordetella pertussis |
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BRUME LPS O-Ag |
LPS O-antigen |
Brucella melitensis, strain 16M |
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BURPS CPS 1 |
CPS: type I LPS |
Burkholderia pseudomallei |
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CAMJE LOS O-Ag 6 |
LOS O-antigen: Penner serotype 6 |
Campylobacter jejuni, strain 81116 |
|
ECOLI EPS colanic (K12) |
EPS slime: colanic acid |
Escherichia coli, strain K-12 |
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ECOLI EPS ECA |
EPS: enterobacterial common antigen |
Escherichia coli, strain K-12 |
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ECOLI EPS K30 |
EPS capsule: K30 (type 1) |
Escherichia coli, strain E69 |
|
ECOLI LPS core (K-12) |
LPS core oligosaccharide |
Escherichia coli, strain K-12 |
|
ECOLI LPS core R1 |
LPS core oligosaccharide: R1 |
Escherichia coli |
|
ECOLI LPS core R2 |
LPS core oligosaccharide: R2 |
Escherichia coli |
|
ECOLI LPS core R3 |
LPS core oligosaccharide: R3 |
Escherichia coli |
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ECOLI LPS core R4 |
LPS core oligosaccharide: R4 |
Escherichia coli |
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ECOLI LPS O-Ag 104 |
LPS O-antigen: 104 |
Escherichia coli |
|
ECOLI LPS O-Ag 111 |
LPS O-antigen: O111 |
Escherichia coli, strain M91 |
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ECOLI LPS O-Ag 113 |
LPS O-antigen: O113 |
Escherichia coli, strain 98NK2 |
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ECOLI LPS O-Ag 157 |
LPS O-antigen: O157 |
Escherichia coli |
|
ECOLI LPS O-Ag 16 (K-12) |
LPS O-antigen: O16 |
Escherichia coli, strain K-12 |
|
ECOLI LPS O-Ag 7 |
LPS O-antigen: O7 |
Escherichia coli |
|
ECOLI LPS O-Ag 75 |
LPS O-antigen: O75 |
Escherichia coli |
|
ECOLI LPS O-Ag 8 |
LPS O-antigen: O8 |
Escherichia coli, strain F492 |
|
ECOLI LPS O-Ag 9a(1) |
LPS O-antigen: O9a |
Escherichia coli, strain F719 |
|
ECOLI LPS O-Ag 9a(2) |
LPS O-antigen: O9a |
Escherichia coli, strain E69 |
|
ECOLI LPS O-Ag B4 |
LPS O-antigen: B4 |
Escherichia coli, strain B4 |
|
ECOLI LPS O-Ag B5 |
LPS O-antigen: B5 |
Escherichia coli, strain B5 |
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ECOLI LPS O-Ag B6 |
LPS O-antigen: B6 |
Escherichia coli, strain B6 |
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ECOLI LPS O-Ag B9 |
LPS O-antigen: B9 |
Escherichia coli, strain B9 |
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ECOLI LPS O-Ag D1 |
LPS O-antigen: D1 |
Escherichia coli, strain Dysenteriae 1 |
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ECOLI LPS O-Ag D1(plasmid) |
LPS O-antigen: D1 |
Escherichia coli, strain Dysenteriae 1 |
|
ECOLI LPS O-Ag F2a |
LPS O-antigen: F2a |
Escherichia coli, strain Flexneri 2a |
|
ECOLI LPS O-Ag Sonnei |
LPS O-antigen |
Escherichia coli, strain 53G1 |
|
ERWAM EPS amylovoran |
EPS: amylovoran |
Erwinia amylovora |
|
ERWST EPS stewartan |
EPS: stewartan |
Erwinia stewartii |
|
KLEPN EPS K2 |
EPS capsule: K2 |
Klebsiella pneumoniae, strain Chedid |
|
KLEPN LPS O-Ag 1 |
LPS O-antigen: O1 (Galactan I) |
Klebsiella pneumoniae, strain 889/50 |
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KLEPN LPS O-Ag 3 |
LPS O-antigen: O3 |
Klebsiella pneumoniae, strain K49S |
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KLEPN LPS O-Ag 8 |
LPS O-antigen: O8 |
Klebsiella pneumoniae |
|
MYXXA LPS O-Ag |
LPS O-antigen |
Myxococcus xanthus, strain DK6640 |
|
PLESH 17 Oag |
LPS O-antigen: O17 |
Plesiomonas shigelloides, strain C27 (ATCC14030) |
|
PSEAE LPS(A) O-Ag 5 |
LPS(Band A) O-antigen: O5 |
Pseudomonas aeruginosa, strain PAO1 |
|
PSEAE LPS(B) O-Ag 11 |
LPS (Band B) O-antigen: O11 |
Pseudomonas aeruginosa, strain PA103 |
|
PSEAE LPS(B) O-Ag 6 |
LPS (Band B) O-antigen: O6 |
Pseudomonas aeruginosa, strain IATS O6 |
|
PSEAE LPS O-Ag 5 |
LPS (Band B) O-antigen: O5 |
Pseudomonas aeruginosa, strain PAO1 |
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RALSTO EPS 1 |
EPS: EPS I |
Pseudomonas solanacearum, strain AW |
|
SALCH EPS colanic (LT2) |
EPS slime: colanic acid |
Salmonella enterica, subspecies sv. Typhimurium, strain LT2 |
|
SALCH EPS Vi (Typhi) |
EPS capsule: Vi-Ag |
Salmonella enterica, strain Gifu 10007 |
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SALCH LPS core (LT2) |
LPS core oligosaccharide |
Salmonella enterica, subspecies sv. Typhimurium, strain LT2 |
|
SALCH LPS O-Ag 2(A) |
LPS O-antigen: O2 (A) |
Salmonella enterica, subspecies sv. Paratyphi A |
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SALCH LPS O-Ag 3,10(E1) |
LPS O-antigen: O3,10 (E1) |
Salmonella enterica, subspecies sv. Anatum, strain M32 |
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SALCH LPS O-Ag 35 |
LPS O-antigen: O35 |
Salmonella enterica, subspecies sv. Adelaide |
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SALCH LPS O-Ag 4 (LT2) |
LPS O-antigen: O4 |
Salmonella enterica, subspecies sv. Typhimurium, strain LT2 |
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SALCH LPS O-Ag 4 (LT2-wzy) |
LPS O-antigen: O4 |
Salmonella enterica, subspecies sv. Typhimurium, strain LT2 |
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SALCH LPS O-Ag 54 |
LPS O-antigen: O54 |
Salmonella enterica, subspecies sv. Borreze |
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SALCH LPS O-Ag 6,7(C1) |
LPS O-antigen: O6,7 (C1) |
Salmonella enterica, subspecies sv. Montevideo, strain M40 |
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SALCH LPS O-Ag 8(C2) |
LPS O-antigen: O8 (C2) |
Salmonella enterica, subspecies sv. Muenchen, strain M67 |
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SALCH LPS O-Ag 9,(D1-Typhi) |
LPS O-antigen: O9 (D1) |
Salmonella enterica, subspecies sv. Typhi, strain Ty2 |
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SALCH LPS O-Ag 9,27,46(D3) |
LPS O-antigen: O9,O27, O46 |
Salmonella enterica, strain 877K |
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SALCH LPS O-Ag 9,46(D2) |
LPS O-antigen: O9,46 (D2) |
Salmonella enterica, subspecies sv. Strasbourg |
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SERMA LPS O-Ag 16 |
LPS O-antigen: O16 |
Serratia marcescens |
|
SERMA LPS O-Ag 4 |
LPS O-antigen: O4 |
Serratia marcescens, strain N28b |
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STAAU CPS 5 |
EPS capsule: type 1 capsule |
Staphylococcus aureus, strain Newman and Reynolds |
|
STAAU EPS 1 |
EPS capsule: type 1 |
Staphylococcus aureus, strain M |
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STAAU EPS 8 |
EPS capsule: type 8 |
Staphylococcus aureus, strain Becker |
|
STRMU CPS c |
CPS: serotype c |
Streptococcus mutans, strain Xc |
|
STRPN CPS 1 |
CPS: type 1 |
Streptococcus pneumoniae |
|
STRPN CPS 14 |
CPS: type 14 |
Streptococcus pneumoniae |
|
STRPN CPS 18C |
CPS: type 18C |
Streptococcus pneumoniae, strain WCH94 |
|
STRPN CPS 19A |
CPS: type 19A |
Streptococcus pneumoniae |
|
STRPN CPS 19B |
CPS: type 19B |
Streptococcus pneumoniae |
|
STRPN CPS 19C |
CPS: type 19C |
Streptococcus pneumoniae |
|
STRPN CPS 19F |
CPS: type 19F capsule |
Streptococcus pneumoniae |
|
STRPN CPS 2 |
CPS: type 2 |
Streptococcus pneumoniae |
|
STRPN CPS 23F |
CPS: type 23F |
Streptococcus pneumoniae |
|
STRPN CPS 3 |
CPS: type 3 capsule |
Streptococcus pneumoniae |
|
STRPN CPS 33F |
CPS: type 33F |
Streptococcus pneumoniae |
|
STRPN CPS 37 |
CPS: 37 |
Streptococcus pneumoniae, strain 7077/39 |
|
STRPN CPS 4 |
CPS: type 4 |
Streptococcus pneumoniae, strain WCH35 |
|
STRPN CPS 6B |
CPS: type 6B |
Streptococcus pneumoniae, strain WCH18 |
|
STRPN CPS 8 |
CPS: type 8 |
Streptococcus pneumoniae, strain WCH56 |
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VIBAN LPS O-Ag 1 |
LPS O-antigen: O1 |
Vibrio anguillarum |
|
VIBCH LPS O-Ag 1 |
LPS O-antigen: O1 |
Vibrio cholerae |
|
VIBCH LPS O-Ag 139 |
LPS O-antigen: O139 |
Vibrio cholerae |
|
VIBCH LPS O-Ag 141 |
LPS O-antigen: O141-2 |
Vibrio cholerae |
|
VIBCH LPS O-Ag 141-3 |
LPS O-antigen: O141-3 |
Vibrio cholerae |
|
VIBCH LPS O-Ag 22 |
LPS O-antigen: O22 |
Vibrio cholerae, strain 169-98 |
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VIBCH LPS O-Ag 69 |
LPS O-antigen: O69 |
Vibrio cholerae |
|
YEREN LPS core 3 |
LPS core oligosaccharide |
Yersinia enterocolitica, strain 6471/76 |
|
YEREN LPS O-Ag 3 |
LPS O-antigen: O3 |
Yersinia enterocolitica, strain 6471/76 |
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YEREN LPS O-Ag 8 |
LPS O-antigen: O8 |
Yersinia enterocolitica |
|
YERPE LPS O-Ag |
LPS O-antigen |
Yersinia pestis, strain EV76 |
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YERPS LPS O-Ag 1B |
LPS O-antigen: 1B |
Yersinia pseudotuberculosis, strain pa3606 |
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YERPS LPS O-Ag IIA |
LPS O-antigen: IIA |
Yersinia pseudotuberculosis, strain M85 |
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Converted to Filemaker Pro 4.0 format and enabled querying through WWW.
Escherichia coli O75 O antigen (Ec O75 O-Ag)
Myxococcus xanthus O antigen (Mx O-Ag)
Salmonella enterica sv Typhi Vi antigen (Se Typhi Vi-Ag)
Streptococcus mutans c-specific antigen (Sm c-specific Ag)
addition of gene clusters for:
Vibrio cholerae O139 O antigen (Vc O139 O-Ag)
Vibrio cholerae O69 O antigen (Vc O69 O-Ag)
Vibrio cholerae O141-2 O antigen (Vc O141-2 O-Ag)
Vibrio cholerae O141-3 O antigen (Vc O141-3 O-Ag)
update of Escherichiacoli K-12 lipid A/core (addition of genes not in main cluster)
Bordetella pertussis LPS
Erwinia stewartii stewartan (Extracellular polysaccharide)
Escherichia coli K-12 colanic acid
Escherichia coli ECA
Escherichia coli K-12 lipid A/core
Escherichia coli (Shigella) Dysenteriae type I O antigen
Escherichia coli O9 O antigen
Escherichia coli O16 (K-12) O antigen
Escherichia coli O111 O antigen
Escherichia coli O7 O antigen
Klebsiella pneumoniae O1 O antigen
Klebsiella pneumoniae O8 O antigen
Salmonella enterica LT2 colanic acid
Salmonella enterica LT2 lipid A/core
Salmonella enterica group B O antigen
Salmonella enterica group C1 O antigen
Salmonella enterica group C2 O antigen
Salmonella enterica group D1 and A O antigens
Salmonella enterica group D2 O antigen
Salmonella enterica group E O antigen
Salmonella enterica group O:54 sv Borreze O antigen
Serratia marcescens O16 O antigen
Pseudomonas aeruginosa O5 O antigen
Yersinia enterocolitica O3 O antigen.
Yersinia enterocolitica O8 O antigen.
Yersinia enterocolitica O3 outer core.
Yersinia pseudotubercolosis IA O antigen
Yersinia pseudotubercolosis IA O antigen
Yersinia pseudotubercolosis IVA O antigen
Yersinia pseudotubercolosis VA O antigen